Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-37 | -8.554e+01 | 0.0000 | 979.0 | 26.55% | 2478.2 | 18.00% | motif file (matrix) |
svg |
2 |
| Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer | 1e-33 | -7.752e+01 | 0.0000 | 995.0 | 26.99% | 2583.3 | 18.77% | motif file (matrix) |
svg |
3 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-29 | -6.796e+01 | 0.0000 | 872.0 | 23.65% | 2251.3 | 16.35% | motif file (matrix) |
svg |
4 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-29 | -6.765e+01 | 0.0000 | 523.0 | 14.18% | 1172.1 | 8.52% | motif file (matrix) |
svg |
5 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-27 | -6.313e+01 | 0.0000 | 858.0 | 23.27% | 2240.1 | 16.27% | motif file (matrix) |
svg |
6 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-25 | -5.959e+01 | 0.0000 | 460.0 | 12.48% | 1028.5 | 7.47% | motif file (matrix) |
svg |
7 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-20 | -4.683e+01 | 0.0000 | 485.0 | 13.15% | 1175.6 | 8.54% | motif file (matrix) |
svg |
8 |
| DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer | 1e-16 | -3.872e+01 | 0.0000 | 857.0 | 23.24% | 2440.8 | 17.73% | motif file (matrix) |
svg |
9 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-16 | -3.859e+01 | 0.0000 | 596.0 | 16.16% | 1582.1 | 11.49% | motif file (matrix) |
svg |
10 |
| ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-15 | -3.676e+01 | 0.0000 | 564.0 | 15.30% | 1494.5 | 10.86% | motif file (matrix) |
svg |
11 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-15 | -3.614e+01 | 0.0000 | 922.0 | 25.01% | 2686.8 | 19.52% | motif file (matrix) |
svg |
12 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-15 | -3.558e+01 | 0.0000 | 613.0 | 16.63% | 1662.8 | 12.08% | motif file (matrix) |
svg |
13 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-15 | -3.522e+01 | 0.0000 | 679.0 | 18.42% | 1881.8 | 13.67% | motif file (matrix) |
svg |
14 |
| En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer | 1e-13 | -3.031e+01 | 0.0000 | 959.0 | 26.01% | 2878.4 | 20.91% | motif file (matrix) |
svg |
15 |
| LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer | 1e-13 | -3.020e+01 | 0.0000 | 745.0 | 20.21% | 2150.6 | 15.62% | motif file (matrix) |
svg |
16 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-12 | -2.796e+01 | 0.0000 | 701.0 | 19.01% | 2026.7 | 14.72% | motif file (matrix) |
svg |
17 |
| DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer | 1e-11 | -2.735e+01 | 0.0000 | 745.0 | 20.21% | 2181.4 | 15.85% | motif file (matrix) |
svg |
18 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-9 | -2.213e+01 | 0.0000 | 411.0 | 11.15% | 1127.9 | 8.19% | motif file (matrix) |
svg |
19 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-9 | -2.199e+01 | 0.0000 | 348.0 | 9.44% | 926.5 | 6.73% | motif file (matrix) |
svg |
20 |
| TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer | 1e-9 | -2.132e+01 | 0.0000 | 550.0 | 14.92% | 1593.6 | 11.58% | motif file (matrix) |
svg |
21 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-9 | -2.114e+01 | 0.0000 | 495.0 | 13.43% | 1412.1 | 10.26% | motif file (matrix) |
svg |
22 |
| TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer | 1e-9 | -2.084e+01 | 0.0000 | 488.0 | 13.24% | 1392.9 | 10.12% | motif file (matrix) |
svg |
23 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-9 | -2.076e+01 | 0.0000 | 399.0 | 10.82% | 1101.9 | 8.00% | motif file (matrix) |
svg |
24 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -1.992e+01 | 0.0000 | 366.0 | 9.93% | 1002.0 | 7.28% | motif file (matrix) |
svg |
25 |
| DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer | 1e-8 | -1.974e+01 | 0.0000 | 443.0 | 12.02% | 1255.2 | 9.12% | motif file (matrix) |
svg |
26 |
| EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer | 1e-8 | -1.879e+01 | 0.0000 | 394.0 | 10.69% | 1104.7 | 8.03% | motif file (matrix) |
svg |
27 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-8 | -1.876e+01 | 0.0000 | 448.0 | 12.15% | 1283.0 | 9.32% | motif file (matrix) |
svg |
28 |
| Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer | 1e-7 | -1.743e+01 | 0.0000 | 387.0 | 10.50% | 1095.9 | 7.96% | motif file (matrix) |
svg |
29 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-7 | -1.631e+01 | 0.0000 | 356.0 | 9.66% | 1005.7 | 7.31% | motif file (matrix) |
svg |
30 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-6 | -1.506e+01 | 0.0000 | 1241.0 | 33.66% | 4107.6 | 29.84% | motif file (matrix) |
svg |
31 |
| ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-6 | -1.483e+01 | 0.0000 | 683.0 | 18.52% | 2132.2 | 15.49% | motif file (matrix) |
svg |
32 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-6 | -1.455e+01 | 0.0000 | 858.0 | 23.27% | 2749.5 | 19.97% | motif file (matrix) |
svg |
33 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-6 | -1.422e+01 | 0.0000 | 1680.0 | 45.57% | 5728.1 | 41.61% | motif file (matrix) |
svg |
34 |
| Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer | 1e-6 | -1.414e+01 | 0.0000 | 143.0 | 3.88% | 348.4 | 2.53% | motif file (matrix) |
svg |
35 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-6 | -1.403e+01 | 0.0000 | 372.0 | 10.09% | 1083.3 | 7.87% | motif file (matrix) |
svg |
36 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-5 | -1.345e+01 | 0.0000 | 919.0 | 24.93% | 2985.1 | 21.69% | motif file (matrix) |
svg |
37 |
| Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer | 1e-5 | -1.316e+01 | 0.0000 | 1057.0 | 28.67% | 3483.8 | 25.31% | motif file (matrix) |
svg |
38 |
| LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer | 1e-5 | -1.289e+01 | 0.0000 | 340.0 | 9.22% | 990.2 | 7.19% | motif file (matrix) |
svg |
39 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-4 | -1.061e+01 | 0.0003 | 407.0 | 11.04% | 1246.8 | 9.06% | motif file (matrix) |
svg |
40 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-4 | -1.055e+01 | 0.0003 | 2003.0 | 54.33% | 7018.3 | 50.99% | motif file (matrix) |
svg |
41 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-4 | -1.035e+01 | 0.0003 | 298.0 | 8.08% | 881.4 | 6.40% | motif file (matrix) |
svg |
42 |
| TATA-Box(TBP)/Promoter/Homer | 1e-4 | -1.022e+01 | 0.0004 | 645.0 | 17.49% | 2078.0 | 15.10% | motif file (matrix) |
svg |
43 |
| BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer | 1e-4 | -1.021e+01 | 0.0004 | 521.0 | 14.13% | 1645.3 | 11.95% | motif file (matrix) |
svg |
44 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-4 | -1.019e+01 | 0.0004 | 214.0 | 5.80% | 606.0 | 4.40% | motif file (matrix) |
svg |
45 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-4 | -9.675e+00 | 0.0006 | 236.0 | 6.40% | 683.0 | 4.96% | motif file (matrix) |
svg |
46 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -9.430e+00 | 0.0008 | 1718.0 | 46.60% | 5987.6 | 43.50% | motif file (matrix) |
svg |
47 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -8.903e+00 | 0.0013 | 72.0 | 1.95% | 169.2 | 1.23% | motif file (matrix) |
svg |
48 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-3 | -8.627e+00 | 0.0016 | 50.0 | 1.36% | 107.3 | 0.78% | motif file (matrix) |
svg |
49 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -8.253e+00 | 0.0023 | 578.0 | 15.68% | 1881.6 | 13.67% | motif file (matrix) |
svg |
50 |
| p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer | 1e-3 | -8.124e+00 | 0.0026 | 22.0 | 0.60% | 35.6 | 0.26% | motif file (matrix) |
svg |
51 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -7.979e+00 | 0.0030 | 820.0 | 22.24% | 2748.4 | 19.97% | motif file (matrix) |
svg |
52 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-3 | -7.864e+00 | 0.0033 | 387.0 | 10.50% | 1221.5 | 8.87% | motif file (matrix) |
svg |
53 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-3 | -7.798e+00 | 0.0034 | 143.0 | 3.88% | 399.5 | 2.90% | motif file (matrix) |
svg |
54 |
| Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer | 1e-3 | -7.737e+00 | 0.0036 | 380.0 | 10.31% | 1199.9 | 8.72% | motif file (matrix) |
svg |
55 |
| Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer | 1e-3 | -7.482e+00 | 0.0045 | 638.0 | 17.30% | 2110.8 | 15.33% | motif file (matrix) |
svg |
56 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -7.321e+00 | 0.0052 | 239.0 | 6.48% | 723.6 | 5.26% | motif file (matrix) |
svg |
57 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-3 | -7.291e+00 | 0.0053 | 105.0 | 2.85% | 282.6 | 2.05% | motif file (matrix) |
svg |
58 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-3 | -7.291e+00 | 0.0053 | 484.0 | 13.13% | 1570.8 | 11.41% | motif file (matrix) |
svg |
59 |
| PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer | 1e-3 | -7.105e+00 | 0.0061 | 107.0 | 2.90% | 290.6 | 2.11% | motif file (matrix) |
svg |
60 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.058e+00 | 0.0063 | 110.0 | 2.98% | 301.0 | 2.19% | motif file (matrix) |
svg |
61 |
| STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer | 1e-3 | -7.053e+00 | 0.0063 | 272.0 | 7.38% | 839.5 | 6.10% | motif file (matrix) |
svg |
62 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -6.980e+00 | 0.0066 | 349.0 | 9.47% | 1105.8 | 8.03% | motif file (matrix) |
svg |
63 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-3 | -6.940e+00 | 0.0068 | 497.0 | 13.48% | 1623.9 | 11.80% | motif file (matrix) |
svg |
64 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.587e+00 | 0.0095 | 209.0 | 5.67% | 632.1 | 4.59% | motif file (matrix) |
svg |
65 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -6.547e+00 | 0.0097 | 456.0 | 12.37% | 1487.1 | 10.80% | motif file (matrix) |
svg |
66 |
| TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer | 1e-2 | -6.515e+00 | 0.0099 | 554.0 | 15.03% | 1834.7 | 13.33% | motif file (matrix) |
svg |
67 |
| ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.228e+00 | 0.0130 | 46.0 | 1.25% | 108.1 | 0.79% | motif file (matrix) |
svg |
68 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-2 | -6.223e+00 | 0.0130 | 79.0 | 2.14% | 209.8 | 1.52% | motif file (matrix) |
svg |
69 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-2 | -6.169e+00 | 0.0134 | 568.0 | 15.41% | 1892.5 | 13.75% | motif file (matrix) |
svg |
70 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-2 | -6.156e+00 | 0.0134 | 405.0 | 10.98% | 1316.4 | 9.56% | motif file (matrix) |
svg |
71 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-2 | -6.028e+00 | 0.0149 | 374.0 | 10.14% | 1210.8 | 8.80% | motif file (matrix) |
svg |
72 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-2 | -5.979e+00 | 0.0155 | 376.0 | 10.20% | 1218.4 | 8.85% | motif file (matrix) |
svg |
73 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-2 | -5.842e+00 | 0.0175 | 596.0 | 16.16% | 2000.5 | 14.53% | motif file (matrix) |
svg |
74 |
| Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer | 1e-2 | -5.784e+00 | 0.0183 | 148.0 | 4.01% | 438.7 | 3.19% | motif file (matrix) |
svg |
75 |
| Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer | 1e-2 | -5.730e+00 | 0.0191 | 27.0 | 0.73% | 56.7 | 0.41% | motif file (matrix) |
svg |
76 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -5.619e+00 | 0.0210 | 191.0 | 5.18% | 585.3 | 4.25% | motif file (matrix) |
svg |
77 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -5.601e+00 | 0.0211 | 263.0 | 7.13% | 832.1 | 6.04% | motif file (matrix) |
svg |
78 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.546e+00 | 0.0220 | 120.0 | 3.25% | 348.5 | 2.53% | motif file (matrix) |
svg |
79 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -5.534e+00 | 0.0220 | 429.0 | 11.64% | 1414.6 | 10.28% | motif file (matrix) |
svg |
80 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-2 | -5.366e+00 | 0.0257 | 916.0 | 24.84% | 3168.9 | 23.02% | motif file (matrix) |
svg |
81 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.304e+00 | 0.0270 | 296.0 | 8.03% | 952.9 | 6.92% | motif file (matrix) |
svg |
82 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.139e+00 | 0.0315 | 173.0 | 4.69% | 531.1 | 3.86% | motif file (matrix) |
svg |
83 |
| CHR(?)/Hela-CellCycle-Expression/Homer | 1e-2 | -5.013e+00 | 0.0352 | 344.0 | 9.33% | 1126.5 | 8.18% | motif file (matrix) |
svg |
84 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-2 | -4.956e+00 | 0.0369 | 73.0 | 1.98% | 201.0 | 1.46% | motif file (matrix) |
svg |
85 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -4.861e+00 | 0.0401 | 554.0 | 15.03% | 1876.2 | 13.63% | motif file (matrix) |
svg |
86 |
| ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer | 1e-2 | -4.837e+00 | 0.0406 | 246.0 | 6.67% | 787.4 | 5.72% | motif file (matrix) |
svg |
87 |
| NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-2 | -4.820e+00 | 0.0408 | 409.0 | 11.09% | 1360.0 | 9.88% | motif file (matrix) |
svg |
88 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-2 | -4.761e+00 | 0.0428 | 78.0 | 2.12% | 219.0 | 1.59% | motif file (matrix) |
svg |
89 |
| Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.644e+00 | 0.0476 | 52.0 | 1.41% | 137.5 | 1.00% | motif file (matrix) |
svg |