Gene interactions and pathways from curated databases and text-mining

Databases - number of unique pairs

  • argdb: 201
  • belLarge: 7495
  • bind: 6360
  • bind_translation: 7755
  • biocarta: 8418
  • biogrid: 126079
  • corum: 3135
  • dip: 4773
  • fastforward: 3197
  • go: 2368
  • hprd: 40478
  • innatedb: 4174
  • intact: 47652
  • kegg: 20288
  • literome: 451847
  • literome (>= 2 PMIDs): 132686
  • matrixdb: 155
  • mppi: 319
  • negatome: 1454
  • ophid: 44771
  • pid: 18510
  • reactome: 88702
  • string: 22863
  • wikipathways: 11949